function [E, V ] = spm_nfm_priors(A,B,C) % prior moments for a neural mass model of ERPs % FORMAT [pE,pC] = spm_nfm_priors(A,B,C) % % A{3},B{m},C - binary constraints on extrinsic connectivity % % pE - prior expectation % % synaptic parameters %-------------------------------------------------------------------------- % pE.T - synaptic time constants % pE.H - synaptic densities % pE.R - activation function parameters % % connectivity parameters %-------------------------------------------------------------------------- % pE.A - extrinsic - coupling % pE.B - extrinsic - trial-dependent % pE.C - extrinsic - stimulus input % pE.G - intrinsic % pE.D - extrinsic delays % pE.I - intrinsic delays % % spatial parameters %-------------------------------------------------------------------------- % pE.eps - inverse velocity % pE.ext - dispersion % pE.A31 ] % pE.A12 ] coupling parameters - single source % pE.A31 ] % %-------------------------------------------------------------------------- % pC - prior covariances: cov(spm_vec(pE)) % % Because priors are specified under log normal assumptions, most % parameters are simply scaling coefficients with a prior expectation % and variance of one. After log transform this renders pE = 0 and % pC = 1; The prior expectations of what they scale are specified in % spm_fx_erp_nfs2 %__________________________________________________________________________ % % David O, Friston KJ (2003) A neural mass model for MEG/EEG: coupling and % neuronal dynamics. NeuroImage 20: 1743-1755 %__________________________________________________________________________ % Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging % Karl Friston % $Id: spm_nfm_priors.m 4305 2011-04-12 18:15:32Z karl $ % defaults %-------------------------------------------------------------------------- if nargin < 3 % a single source model A = {0 0 0}; B = {0}; C = 1; end n = size(C,1); % number of sources % disable log zero warning %-------------------------------------------------------------------------- warning('off','MATLAB:log:logOfZero'); % parameters for neural-field forward model %========================================================================== % sigmoid parameters %-------------------------------------------------------------------------- E.R = 0; V.R = 1/64; % set intrinsic [excitatory] time constants %-------------------------------------------------------------------------- E.T = log(ones(n,1)); V.T = ones(n,1)/16; % time constants E.H = log(ones(n,1)); V.H = ones(n,1)/16; % synaptic density % set intrinsic connections %-------------------------------------------------------------------------- E.G = log(ones(n,4)); V.G = ones(n,4)/16; % intrinsic connections % set spatial parameters %-------------------------------------------------------------------------- E.vel = 0; V.vel = 1/16; E.ext = 0; V.ext = 1/16; % set extrinsic connectivity %-------------------------------------------------------------------------- Q = sparse(n,n); for i = 1:length(A) A{i} = ~~A{i}; E.A{i} = A{i}*32 - 32; % forward V.A{i} = A{i}/16; % backward Q = Q | A{i}; % and lateral connections end for i = 1:length(B) B{i} = ~~B{i}; E.B{i} = 0*B{i}; % input-dependent scaling V.B{i} = B{i}/8; Q = Q | B{i}; end C = ~~C; E.C = C*32 - 32; % where inputs enter V.C = C/32; warning('on','MATLAB:log:logOfZero');