function varargout = pm_estimate_ramp(varargin) % % Estimates and removes linear phase-ramps in the x-, y- and % z-direction in pm. % FORMAT: [ramps,pm] = pm_estimate_ramp(pm,mask) % % Input: % pm : 2 or 3D phasemap that has not been unwrapped % mask : Mask that indicates which voxels are worth % bothering with and which are not. % % Output: % ramps : 3x1 vector with ramp values (radians/voxel) in the x-, % y- and z-direction. Estimated as mean(wrap(phi(x+1)-phi(x))) % for the x-direction and equivalently for the other directions. % pm : Same as pm in, but with linear ramps removed. % % This routine was written on the suggestion of Mark J, and will % potentially improve performance of subsequent phase-unwrapping. % I haven't actually found it particularly helpful, and it may % simply have been a sneaky fMRIB attempt to delay the SPM % phasemap toolbox. % 30/9-03 %_______________________________________________________________________ % Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging % Jesper Andersson % $Id: pm_estimate_ramp.m 1317 2008-04-08 16:16:38Z chloe $ error('mex-function pm_estimate_ramp.c not compiled');